BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F11SP1|AL427938
(971 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1000 1904 0.0
>3x_Contig1000
Length = 4837
Score = 1904 bits (957), Expect = 0.0
Identities = 965/971 (99%)
Strand = Plus / Minus
Query: 1 gatcataaaaagatagatcatatatgtatatatataawcgtatatcttttaaagcagctc 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3845 gatcataaaaagatagatcatatatgtatatatataaacgtatatcttttaaagcagctc 3786
Query: 61 gaagctatcagattccgataataaatggaaccgaactacagtctcataacagactcagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3785 gaagctatcagattccgataataaatggaaccgaactacagtctcataacagactcagtt 3726
Query: 121 gatgcgtgtgtycctcagttcatggtggggtgaatgaggagcacggtgagaaaccttcct 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3725 gatgcgtgtgtccctcagttcatggtggggtgaatgaggagcacggtgagaaaccttcct 3666
Query: 181 tgccgagtgagtttataatcatggccgtccaggcagaaaaagctgcggagatgagagaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3665 tgccgagtgagtttataatcatggccgtccaggcagaaaaagctgcggagatgagagaag 3606
Query: 241 aaattaaaaatcaatacaaagccggctgtttcctttttcggtattttccgcagtccggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3605 aaattaaaaatcaatacaaagccggctgtttcctttttcggtattttccgcagtccggtt 3546
Query: 301 tgtcctgttttcttcctgcctcttcgtgtgttaaaaataaaggtccaaatgacagtacaa 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3545 tgtcctgttttcttcctgcctcttcgtgtgtcaaaaataaaggtccaaatgacagtacaa 3486
Query: 361 atccgggtaatttatttctaacgggcttaccgctcattgtgatcttagatttagtaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3485 atccgggtaatttatttctaacgggcttaccgctcattgtgatcttagatttagtaagag 3426
Query: 421 aagaatgttggtcacgtgcttcgattcaatttgagtggggctgcaactgttgttgtcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3425 aagaatgttggtcacgtgcttcgattcaatttgagtggggctgcaactgttgttgtcttt 3366
Query: 481 gggtaatgattgtwaacacttgcacatctctatggttatatggtccggtaattgtagccc 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3365 gggtaatgattgtaaacacttgcacatctctatggttatatggtccggtaattgtagccc 3306
Query: 541 gaattggttcatacacgttataagcaatttgctgcaacgaaggtatgcttgtagttgcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3305 gaattggttcatacacgttataagcaatttgctgcaacgaaggtatgcttgtagttgcaa 3246
Query: 601 agtgttcgttgtgtggactctagtagatttggaaattggagaaagcattttggataccat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3245 agtgttcgttgtgtggactctagtagatttggaaattggagaaagcattttggataccat 3186
Query: 661 ggtgtcccttgcagaaaagagtttccacatatctagtacccttttcatgaggaaggaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3185 ggtgtcccttgcagaaaagagtttccacatatctagtacccttttcatgaggaaggaatc 3126
Query: 721 agtgtgtwaaaccaaagagtttaaaagttcgtaacttctaccaacttgtgcgagatcctc 780
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3125 agtgtgtaaaaccaaagagtttaaaagttcgtaacttctaccaacttgtgcgagatcctc 3066
Query: 781 ggagatggctgaccgtacaacgatatcccagactttggcaacgtttggtaaaaagaccgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3065 ggagatggctgaccgtacaacgatatcccagactttggcaacgtttggtaaaaagaccgc 3006
Query: 841 ctgctgtgtagagagcatgggacatagtaagagaagtagatctaagcatttatttctcac 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3005 ctgctgtgtagagagcatgggacatagtaagagaagtagatctaagcatttatttctcac 2946
Query: 901 ggaacgcgatgaatgtgttaagagcctgtctgcgtacgtccaaaaccttaaaagtwacat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2945 ggaacgcgatgaatgtgttaagagcctgtctgcgtacgtccaaaaccttaaaagtaacat 2886
Query: 961 ataggcatccc 971
|||||||||||
Sbjct: 2885 ataggcatccc 2875
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6790
Number of Sequences: 1807
Number of extensions: 6790
Number of successful extensions: 82
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)